BJcode Company

Process

How We Work

This section is managed and supervised by a specialist in bioinformatics and medical genetics, ensuring high-quality analysis and scientific accuracy.

Bioinformatics & NGS Data Analysis Services

Transform Your Raw Biological Data Into Clear, Actionable Insights

Modern genomic technologies generate massive amounts of data — but turning that data into meaningful biological or clinical conclusions requires expertise, powerful tools, and a reliable workflow.

On this page, we offer end-to-end bioinformatics and biological data analysis services designed for researchers, clinicians, laboratories, and biotech startups.

Tools & Skills

Languages: Python, R, Bash
Platforms: Linux, Galaxy, IGV, Bioconductor
Tools: FastQC, BWA, STAR, Samtools, GATK, DESeq2, OptiType
Databases: Ensembl, UCSC, ClinVar, IMGT/HLA, KEGG

Why Work With Us?

3+ years of practical experience in bioinformatics & clinical genomics
Accurate, fast, and well-documented results
Clear communication throughout all project steps
Strict confidentiality and secure data handling
Customized workflows designed specifically for your dataset and goals

Before You Order:

Please contact us with a short description of your project, including:

Data type (NGS, RNA-Seq, DNA-Seq, FASTQ, VCF, etc.)
Project goals
Number of samples / dataset size
Deadline or timeline

I will review your information and provide a customized plan, estimated delivery time, and recommended workflow.

Let's Turn Your Data Into Discovery

Whether you're conducting research, running a clinical study, or building a biotech product, I can help you extract accurate and meaningful insights from your biological data.

Services

What We Offer

Comprehensive bioinformatics services for research and clinical applications

Next-Generation Sequencing (NGS) Analysis

Comprehensive processing and analysis of FASTQ files, including:

Quality control & trimming (FastQC, Trimmomatic)
Read alignment (BWA, HISAT2, STAR)
Variant calling (GATK, FreeBayes, Samtools)
Variant annotation (ClinVar, dbSNP, Ensembl, KEGG)

RNA-Seq / Transcriptomics Analysis

Advanced gene expression analysis for research and clinical projects:

Differential expression (DESeq2, edgeR)
Clustering and sample similarity analysis
Gene ontology & pathway enrichment
Publication-ready heatmaps, volcano plots, PCA

HLA Typing

Accurate allele identification for immunology, transplantation, and clinical studies:

OptiType
HLA-VBSeq
NGSengine

Clinical Genomics & Variant Interpretation

Interpretation and classification of genetic variants using trusted databases:

ClinVar, dbSNP, Ensembl, HGMD*
Gene panel analysis (cancer, inherited disorders, screening panels)
Pharmacogenomics insights
*Use of HGMD depends on project licensing availability

Custom Bioinformatics Pipelines

Development of fully tailored workflows using:

Python, R, Bash
Bioconductor ecosystem
Linux-based analysis environments
Galaxy workflows
Ideal for labs, research groups, and biotech teams with unique needs

Scientific Visualization & Reporting

High-quality outputs ready for publication or presentation:

Heatmaps
Volcano plots
PCA
Summary tables
All reports delivered in PDF, HTML, or Markdown